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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1617806 chr2:61378186 C/A C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs1665260 chr2:61384487 A/T C2orf74 chr2:61372203-61391964:+ 0.61 6.19 9.8E-8 Box Plot
ACC rs1665262 chr2:61383162 G/A C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs1665263 chr2:61382759 T/C C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs1665270 chr2:61377666 T/A C2orf74 chr2:61372203-61391964:+ 0.61 6.21 9.01E-8 Box Plot
ACC rs1665271 chr2:61378816 A/G C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs1665273 chr2:61379944 T/C C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs1665274 chr2:61380088 T/C C2orf74 chr2:61372203-61391964:+ 0.64 6.2 9.41E-8 Box Plot
ACC rs1665279 chr2:61342043 C/T C2orf74 chr2:61372203-61391964:+ 0.47 5.1 4.89E-6 Box Plot
ACC rs16840594 chr3:133407599 C/T NPHP3 chr3:132399453-132441286:- 0.4 5.2 3.43E-6 Box Plot
ACC rs16840595 chr3:133409004 A/G NPHP3 chr3:132399453-132441286:- 0.4 5.2 3.43E-6 Box Plot
ACC rs1685195 chr20:44359847 C/T WFDC3 chr20:44376583-44420571:- 0.89 6.64 1.85E-8 Box Plot
ACC rs1685196 chr20:44359735 T/C WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs1685198 chr20:44370929 T/C WFDC3 chr20:44376583-44420571:- 0.92 6.82 9.6E-9 Box Plot
ACC rs16907160 chr12:31187083 G/A DDX11 chr12:31226779-31257725:+ 0.7 6.57 2.36E-8 Box Plot